PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023926837.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family NAC
Protein Properties Length: 311aa    MW: 35481.4 Da    PI: 8.307
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023926837.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM163.86.1e-51161462128
             NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 
                      pGfrFhPtdeelv +yL++kv++k++++ e ik++diyk++PwdLp+    + +++ewyfF++r +ky+++ r+nr+t sg+Wkatg dk+v+s
  XP_023926837.1  16 LPGFRFHPTDEELVAFYLRRKVDKKTISM-ELIKQIDIYKHDPWDLPRasGSTVKDTEWYFFCRRGRKYRNSIRPNRVTGSGFWKATGIDKPVYS 109
                     59***************************.99***************5233444888************************************** PP

             NAM  95 k...kgelvglkktLvfykgrapkgektdWvmheyrl 128
                     +   ++  +glkktLv+y+g+a kg+ktdW+mhe+rl
  XP_023926837.1 110 TggeGRDCIGLKKTLVYYRGTAGKGSKTDWMMHEFRL 146
                     96554555***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    
MSNQGTSQLE DEVDQLPGFR FHPTDEELVA FYLRRKVDKK TISMELIKQI DIYKHDPWDL  60
PRASGSTVKD TEWYFFCRRG RKYRNSIRPN RVTGSGFWKA TGIDKPVYST GGEGRDCIGL  120
KKTLVYYRGT AGKGSKTDWM MHEFRLPAPS DTNTNTNTKL DNAKSTAQEA EIWTLCRIFK  180
RNLSHRKYTP DWRELSTKRH HADTSSKACS GESSHNRESY INFGAPFIFQ NENNNEIKTV  240
NHINNESNQL HVGQLSSSIA QPPSSSSIAQ PPSSSSSFPI NPVPDASEFF AYENWDELRS  300
VVEFAYDPSL M
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12910.11e-90NAC family protein