PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023926616.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family ERF
Protein Properties Length: 375aa    MW: 41271 Da    PI: 6.5105
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023926616.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2651.5e-20180229255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                      y+GVr+++ +g+WvAeIr p++   r+r +lg+++taeeAa a+++a+ kl+g
  XP_023926616.1 180 LYRGVRQRH-WGKWVAEIRLPKN---RTRLWLGTYDTAEEAALAYDKAAYKLRG 229
                     59******9.**********965...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 375 aa     Download sequence    
MAATMDFYSS RPLQSSGPFG GELMEALEPF MKSTSPTPTT SSPSETQSPF LSSSSSAPSL  60
SSPSYSYNNY LSFSPSVPTQ TQPSSSYPDG CSTSMTHMFS DGFSTQNLIG FEQPGSIGLN  120
HLTPSQIHQI QIQIHLQSQH FYPQNQQPQH GSCSSNTLSF LSPKPIPMKQ VGTPPKPTKL  180
YRGVRQRHWG KWVAEIRLPK NRTRLWLGTY DTAEEAALAY DKAAYKLRGD FARLNFPNLR  240
HHGSCVGGDF GEYQPLHSSV DAKLQAICES LANAPPKTEK QSKKSKKAEA EAELKKKKKQ  300
EEEVVVESKV SENCCKVEIT STSSVVTESD GSVGSSPFSD LTFPDSNEPE WEIGSDNFML  360
EKYPSEIDWA AILSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78080.18e-58ERF family protein