PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023925977.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

GRF

Protein Properties

Length: 332aa MW: 36515.2 Da PI: 8.016

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023925977.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	78.5	6.5e-25	87	131	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCs+++++++k+CErH+hrgr+rsrk++e+ XP_023925977.1 87 DPEPGRCRRTDGKKWRCSKDAYPDSKYCERHMHRGRNRSRKPVES 131 79****************************************986 PP
2	QLQ	63.3	6.4e-22	25	61	1	37
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 s+FT +Q+q+L++Q+l++Ky++a++PvPp+L+++iq+ XP_023925977.1 25 SPFTVSQWQELEHQALIFKYMVAGLPVPPDLMLPIQR 61 89*********************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 332 aa Download sequence
MNSTGGGGAG GGSVSGTGIG TGMRSPFTVS QWQELEHQAL IFKYMVAGLP VPPDLMLPIQ 60 RSFESISHRF FHHPTMGYCS FYGKKVDPEP GRCRRTDGKK WRCSKDAYPD SKYCERHMHR 120 GRNRSRKPVE SQTMTQSTSS TVTSLTVTGG SSGNGSLQNL PLSAFGNPQG ASSGANQSQY 180 HLDSIPYGIP NKDYRYLPGL KPEVGEHSFF SDASGSNRNL QMDSQLDGTW PLMPSRVASF 240 PASKSSDNSM LQNDYPQHSF FNSDFASGEP VKQEGQSLRP FFDEWPKTRE SWSGLEDERS 300 NQTSFSTTQL SISIPMTTSD FSATSSRSPH DN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	1e-46	GRF family protein