PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023925670.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

FAR1

Protein Properties

Length: 652aa MW: 75689 Da PI: 7.5388

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023925670.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	26.9	1.6e-08	2	41	53	91
FAR1 53 rtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 r+r+ tr gCka ++++ e+ g+w+v +++ eHnH+l+p XP_023925670.1 2 RERPITRSGCKAAFRIRFERkLGEWVVGEFKREHNHDLVP 41 68999**********99989*************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 652 aa Download sequence
MRERPITRSG CKAAFRIRFE RKLGEWVVGE FKREHNHDLV PQLETQFLRS HRTIKDSDKA 60 QIMALHNVGV KSNQIMDHMI QQAGGYENIG FTSKDLYNYL ATIRNNSTRD GDAECALAYL 120 QAKADMDSSF FFQYTTDEES RLANLFWTDS QSRLDYACFG DVVAFDTTYK TNVYKKPLVI 180 LVGVNHHRQT IVFGFGLLVD ETIETYTWVL QNMLVAMNNK TPISVVTDGD KAMSKAIKTV 240 FPKSRHRLCV WHLERNAFAN LHDKVYESFI RCMVRYVTPD EFEDMWKKMV DNYNLHNHEW 300 LHEMYAKKMK WAEAYMRGHF FSGCRSTQRC EAMNAFLNRF LDRKTRLYEL FQQVDRALSR 360 IRHNEMGADF SSNYTEPILI TGLAEIEKHA ATIFTREIFS MVQEELLNEQ KFIVLYYIDK 420 EGYRTYTLSQ YASPDSRWEV EYCQADQSMK CSCLLFESYG YPCGHLFAIM KVEHLKQIPP 480 TCIMNRWLKT AKSDLPCKLE SQMSPDIIRM ARFSALSASC SQMCYFDSRT TQGFEELKVE 540 IARLTRRMEE LYNSSKEAVE DGIRTTSNKA NLNVRDPVIV KTKGDHGSTS NSHSHAKVRR 600 CSNCKDVGHT RRTCPSTHIQ QGERVDGDNV PESMEDPAVG SPDLETNYYN FL

Sequence ? help Back to Top

Protein Sequence Length: 652 aa Download sequence

MRERPITRSG CKAAFRIRFE RKLGEWVVGE FKREHNHDLV PQLETQFLRS HRTIKDSDKA  60
QIMALHNVGV KSNQIMDHMI QQAGGYENIG FTSKDLYNYL ATIRNNSTRD GDAECALAYL  120
QAKADMDSSF FFQYTTDEES RLANLFWTDS QSRLDYACFG DVVAFDTTYK TNVYKKPLVI  180
LVGVNHHRQT IVFGFGLLVD ETIETYTWVL QNMLVAMNNK TPISVVTDGD KAMSKAIKTV  240
FPKSRHRLCV WHLERNAFAN LHDKVYESFI RCMVRYVTPD EFEDMWKKMV DNYNLHNHEW  300
LHEMYAKKMK WAEAYMRGHF FSGCRSTQRC EAMNAFLNRF LDRKTRLYEL FQQVDRALSR  360
IRHNEMGADF SSNYTEPILI TGLAEIEKHA ATIFTREIFS MVQEELLNEQ KFIVLYYIDK  420
EGYRTYTLSQ YASPDSRWEV EYCQADQSMK CSCLLFESYG YPCGHLFAIM KVEHLKQIPP  480
TCIMNRWLKT AKSDLPCKLE SQMSPDIIRM ARFSALSASC SQMCYFDSRT TQGFEELKVE  540
IARLTRRMEE LYNSSKEAVE DGIRTTSNKA NLNVRDPVIV KTKGDHGSTS NSHSHAKVRR  600
CSNCKDVGHT RRTCPSTHIQ QGERVDGDNV PESMEDPAVG SPDLETNYYN FL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-105	FAR1 family protein