PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023925372.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family ERF
Protein Properties Length: 229aa    MW: 24925.8 Da    PI: 9.6257
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023925372.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP241.82.7e-1374118655
             AP2   6 VrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                        ++++g+Wv+eIr p+    + +r++lg++ t ++Aa a++ a+++l+g
  XP_023925372.1  74 A--RSRSGKWVSEIRQPR----KaTRIWLGTYPTRDMAATAYDVAALALRG 118
                     5..5789*********84....36*************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    
MAKNPSNVRR NNPYRLANVR REETAVNPST PATVATSSST ITPATSPISE SEVFSGQPGS  60
SSSSSTKHKK FRGARSRSGK WVSEIRQPRK ATRIWLGTYP TRDMAATAYD VAALALRGPN  120
TVLNFPDLIL WYPIPLSKSP VDIRAAAACA AEARMERSSE SSSDHQETAH LKRTGEKHFI  180
DEEELLNMPS LLVNMAEGML LTPPRIQSKS SSDESGGDGN GDGLWSYAY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.11e-33ERF family protein