PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023925294.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

NAC

Protein Properties

Length: 497aa MW: 56704 Da PI: 5.7993

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023925294.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	142.7	2.1e-44	15	140	2	127
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 p+GfrF Ptdeelv++yLk k++g+k + ++i+ev+i+k+ePwdLp + ++++++ew+fF+ r+ + +r+nratk+gyWk+tg+d+++++ XP_023925294.1 15 PVGFRFLPTDEELVSYYLKLKMQGDKDYEVRAISEVNICKHEPWDLPglSVIQSDDQEWFFFCAREIN---RSRANRATKRGYWKSTGRDRKIKA 106 89********************99777799***********6448889999***9875...67****************** PP NAM 95 k.kgelvglkktLvfykgrapkgektdWvmheyr 127 k +++++g+kktLvf++gr p+g++t+Wv+hey+ XP_023925294.1 107 KgTNTVIGTKKTLVFHEGRVPTGVRTSWVIHEYQ 140 9666779************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 497 aa Download sequence
MTSMTYSETG LDSIPVGFRF LPTDEELVSY YLKLKMQGDK DYEVRAISEV NICKHEPWDL 60 PGLSVIQSDD QEWFFFCARE INRSRANRAT KRGYWKSTGR DRKIKAKGTN TVIGTKKTLV 120 FHEGRVPTGV RTSWVIHEYQ PVAFHHHQKA FVLCRLKRKT DVKTNEAPLD DASDFETQVP 180 GHTIPEVDAD LASLHQRQRQ DYDMASSLQL EEYNQREPPD LDPVLTDDFD YDVMKYLSDD 240 NEQEEDQFVN SLFNQQDEYT LEEVRQSNDS RAPDSPITIY YDGGELSSDS DTDTTEAPHQ 300 RMHMINSGTA SSSNRGQYKE KRNGVILDDF LGLDSSSVDS AAYIPRVRST QSRGLRSPPS 360 IGPFNLQYQQ SSRRSEVQRA APRKVQLQSS SLKVVSLEKA KDASRLSITT NLPQKERSIM 420 ESDKEQKIAQ GTNADNSPKS KKVRSAGSDW KGSLIFQETS LHGHESSPPS EYFAKCLFGI 480 IFFVFIIWEM LLHGNWY

Sequence ? help Back to Top

Protein Sequence Length: 497 aa Download sequence

MTSMTYSETG LDSIPVGFRF LPTDEELVSY YLKLKMQGDK DYEVRAISEV NICKHEPWDL  60
PGLSVIQSDD QEWFFFCARE INRSRANRAT KRGYWKSTGR DRKIKAKGTN TVIGTKKTLV  120
FHEGRVPTGV RTSWVIHEYQ PVAFHHHQKA FVLCRLKRKT DVKTNEAPLD DASDFETQVP  180
GHTIPEVDAD LASLHQRQRQ DYDMASSLQL EEYNQREPPD LDPVLTDDFD YDVMKYLSDD  240
NEQEEDQFVN SLFNQQDEYT LEEVRQSNDS RAPDSPITIY YDGGELSSDS DTDTTEAPHQ  300
RMHMINSGTA SSSNRGQYKE KRNGVILDDF LGLDSSSVDS AAYIPRVRST QSRGLRSPPS  360
IGPFNLQYQQ SSRRSEVQRA APRKVQLQSS SLKVVSLEKA KDASRLSITT NLPQKERSIM  420
ESDKEQKIAQ GTNADNSPKS KKVRSAGSDW KGSLIFQETS LHGHESSPPS EYFAKCLFGI  480
IFFVFIIWEM LLHGNWY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35580.1	4e-60	NAC family protein