PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023925291.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | NAC | ||||||||
Protein Properties | Length: 499aa MW: 56267.6 Da PI: 7.2217 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 143.5 | 1.2e-44 | 10 | 139 | 1 | 127 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 +p+G+rF+Ptdeelv++yL+ k++g k + ++i ev+iyk+ePwdL+ + + ++++ew+fF+ + ky++++r+nr t++gyWk+tg+d++++ XP_023925291.1 10 VPVGYRFRPTDEELVSHYLRLKMQGGKDFEVQAIGEVNIYKHEPWDLRelSVIPSDDQEWFFFCAWEIKYSNSNRSNRLTEKGYWKSTGRDRNIK 104 599*********************999555589**************84337778999************************************* PP NAM 94 sk.kgelvglkktLvfykgrapkgektdWvmheyr 127 ++ +++++g+kktLvfy gr ++g++t Wv+hey+ XP_023925291.1 105 ARgTNNVIGTKKTLVFYVGRGRNGVRTPWVIHEYK 139 *967778***************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 499 aa Download sequence |
MTSSGNGLKV PVGYRFRPTD EELVSHYLRL KMQGGKDFEV QAIGEVNIYK HEPWDLRELS 60 VIPSDDQEWF FFCAWEIKYS NSNRSNRLTE KGYWKSTGRD RNIKARGTNN VIGTKKTLVF 120 YVGRGRNGVR TPWVIHEYKP ATFLPHEKPF VLCRLFKKAD LRTNEAPCDD GDVSSYAASD 180 FEGQVPAHTI PEIHEFNRLD ADLASLLQSQ HQGYAFASSL QLKEYSQPEP SVVDPTFTDG 240 FEQDYNFANE QAEVQFVNSF INQQDEYTFE EFRQSNDSRA PESSIKIYYN GGGLSSDSDT 300 DTAQAQHQQM HIINGGTASS SNRSQYKENR NGVVLDASSV DSAADIGHVL STQSQGQRSP 360 PSIGTLKLQY QPRSSHTVEQ RAAPRKFHLK NSSLKVVSID KAKDASRLSI TTNLPQKERS 420 TTESDKEQKM AQGTNADNSP KLKKVRSAGS DRKGSLIFQE TSLQGHESSP PLVYFFKILI 480 GIFLFVVFVR EMLLHGNWC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35580.1 | 1e-55 | NAC family protein |