PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023925273.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family B3
Protein Properties Length: 395aa    MW: 44704.3 Da    PI: 6.1433
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023925273.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B31031.6e-32104207199
                     EEEE-..-HHHHTT-EE--HHH.HTT...---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SS.SEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh...ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld.gr.sef 90 
                     f+kv tpsdv+k++rlv+pk++ae+h   ++ +e++  l++ed++g+ W+++++y+++s++yv+tkGW++Fvk+++L++gD+v F++  g+  + 
  XP_023925273.1 104 FDKVVTPSDVGKLNRLVIPKQHAEKHfplDSTNEKGLLLSFEDRNGKPWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFERGvGEsGKD 198
                     89***************************77788999*************************************************665777888 PP

                     ..EEEEE-S CS
              B3  91 elvvkvfrk 99 
                     +l++ ++r+
  XP_023925273.1 199 RLYIDWRRR 207
                     999999997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 395 aa     Download sequence    
MEFLQEEKGF SDREEEEEEE ENMRETRKSE YHVQEEAVAR SYDQALAPAE AINFNSKLQL  60
MELSPGNDNY DEAAEATGGG GGGDGGGGVG FSTHHESIEK EHMFDKVVTP SDVGKLNRLV  120
IPKQHAEKHF PLDSTNEKGL LLSFEDRNGK PWRFRYSYWN SSQSYVMTKG WSRFVKEKKL  180
DAGDIVSFER GVGESGKDRL YIDWRRRPDA PNLTNYPHFD RSLRWPSRLY STPQPSSVSQ  240
HYEHLQQMNY NIHPYQHYHH QHHHHHNQYL QSGTHDLYNY NAVSSGSGSS LYYLRSSGSH  300
GDQIINGAAL PQGGDIVPMA IDSVQPVVHR GNTVAKRLRL FGVNMECSIP EEPECPSVSM  360
PPQLLRLPNA TTVLPTIPSE FSNKGKSSLT FDAEP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46870.15e-70B3 family protein