PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023925269.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family B3
Protein Properties Length: 425aa    MW: 47912.9 Da    PI: 6.4022
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023925269.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3102.81.9e-32134237199
                     EEEE-..-HHHHTT-EE--HHH.HTT...---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SS.SEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh...ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld.gr.sef 90 
                     f+kv tpsdv+k++rlv+pk++ae+h   ++ +e++  l++ed++g+ W+++++y+++s++yv+tkGW++Fvk+++L++gD+v F++  g+  + 
  XP_023925269.1 134 FDKVVTPSDVGKLNRLVIPKQHAEKHfplDSTNEKGLLLSFEDRNGKPWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFERGvGEsGKD 228
                     89***************************77788999*************************************************665777888 PP

                     ..EEEEE-S CS
              B3  91 elvvkvfrk 99 
                     +l++ ++r+
  XP_023925269.1 229 RLYIDWRRR 237
                     999999997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 425 aa     Download sequence    
MEFLQEEKGF SDREEEEEEE ENMRETSKLS FLSSSSSSAS SKSKAFLPHY HQNLWLGKSE  60
YHVQEEAVAR SYDQALAPAE AINFNSKLQL MELSPGNDNY DEAAEATGGG GGGDGGGGVG  120
FSTHHESIEK EHMFDKVVTP SDVGKLNRLV IPKQHAEKHF PLDSTNEKGL LLSFEDRNGK  180
PWRFRYSYWN SSQSYVMTKG WSRFVKEKKL DAGDIVSFER GVGESGKDRL YIDWRRRPDA  240
PNLTNYPHFD RSLRWPSRLY STPQPSSVSQ HYEHLQQMNY NIHPYQHYHH QHHHHHNQYL  300
QSGTHDLYNY NAVSSGSGSS LYYLRSSGSH GDQIINGAAL PQGGDIVPMA IDSVQPVVHR  360
GNTVAKRLRL FGVNMECSIP EEPECPSVSM PPQLLRLPNA TTVLPTIPSE FSNKGKSSLT  420
FDAEP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46870.11e-69B3 family protein