PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023925232.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family NAC
Protein Properties Length: 276aa    MW: 32063.1 Da    PI: 9.7382
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023925232.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM60.46.1e-19598188
             NAM  1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiy.kvePwdLp.k..kvkaeek...ewyfFskrdkkyatgkrknratk..sgyWkatgk 88
                    lp+GfrF+Ptd+elv+++L+++  gk+++  +++ke+d+y k ePw++  +  +v++ ++   ++yfF+k  k+y++g+r  r +   sg+Wk+  +
  XP_023925232.1  5 LPVGFRFNPTDDELVTHFLRNRNLGKPTPS-NAVKECDLYgKKEPWEIWdMfsAVDG-SRvvrQLYFFTKL-KTYKNGRRIDRRVGsgSGTWKKEHQ 98
                    79*************************999.89*****99456*****733432222.2234377999887.5689999999965434899**8766 PP
2NAM68.61.7e-211342563127
             NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiy.kvePwdLpkkvkaeek...ewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 
                      G+rF+Ptdeelv++yL+kk  gk+++l + +k++d+y k ePw++  +++a+++   ++yfF+k  k+y +g+r  r + sg W++    k+ l
  XP_023925232.1 134 NGYRFDPTDEELVTNYLRKKNMGKPIPL-NPVKDCDLYgKKEPWEIWDMFSAGDTvvkQLYFFTKL-KTYDNGTRFDRRVGSGSWSKDKLCKSPL 226
                     69**************************.88*****99456*****86555555544377888886.6699**************9655433333 PP

             NAM  94 skkgelvglkktLvfykg.rapkgektdWvmheyr 127
                     +        k  + + ++ ++++ ++ +W++ ey+
  XP_023925232.1 227 K-----GIEKSRFRYENNdNSSSKQNGNWILYEYK 256
                     3.....456777888755355666789*******6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 276 aa     Download sequence    
MENELPVGFR FNPTDDELVT HFLRNRNLGK PTPSNAVKEC DLYGKKEPWE IWDMFSAVDG  60
SRVVRQLYFF TKLKTYKNGR RIDRRVGSGS GTWKKEHQLK TPGLVGVEKS RFSYENNDDK  120
SSKLPSSSTS SGRNGYRFDP TDEELVTNYL RKKNMGKPIP LNPVKDCDLY GKKEPWEIWD  180
MFSAGDTVVK QLYFFTKLKT YDNGTRFDRR VGSGSWSKDK LCKSPLKGIE KSRFRYENND  240
NSSSKQNGNW ILYEYKDMNP PNQDSNEYVL CRSTVI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62380.18e-20NAC family protein