PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023924824.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family ERF
Protein Properties Length: 344aa    MW: 38152.6 Da    PI: 4.9596
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023924824.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.91.7e-20187237255
             AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+++AeIrdp   + +  r++lg+f+ta eAaka+++a+ kl+g
  XP_023924824.1 187 HYRGVRQRP-WGKYAAEIRDP---NrRGSRVWLGTFDTAIEAAKAYDRAAFKLRG 237
                     7********.**********9...4334*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 344 aa     Download sequence    
MEAAFEFSSE LDRIKLHLLG ELSPLGMGGF FSNDTEVSNS ESQSNSSSSS SLSYRTSSLD  60
SNELCSDSSM AFGDLFGSTE LFDFTFPTDF PEFEVKPEII DLSTPKPLDS ANGYSEYEPK  120
PTVPKTLTES NRKPSLKISL PSKGTTEWIR FGNPDQPQPE PSVSAVPVPA AQNNNNSNSG  180
VEEKKRHYRG VRQRPWGKYA AEIRDPNRRG SRVWLGTFDT AIEAAKAYDR AAFKLRGSKA  240
ILNFPLEAGK PETTAATVVS NNNDKKRRRV EEEQVVEEVK VVVKKERVTE SQDVMSYLKD  300
IPLTPSSWTA VCDWDSDVKG IFNVPPLSPL SPHPQMGYPQ LMVV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1266270KRRRV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47230.13e-57ERF family protein