PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023924715.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | GRAS | ||||||||
Protein Properties | Length: 164aa MW: 17852.5 Da PI: 5.9117 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 143.7 | 1.8e-44 | 14 | 161 | 226 | 374 |
GRAS 226 evLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsl.eaklpreseerikvErellgreivnvvacegaerrerhetlekWrerl 319 L+l+ l+Pk++++veq+++h ++ Fl+rf++al+yysalfd+l +l+ +s er++vE++l+g ei+n+va g +r+ +e++e+W + l XP_023924715.1 14 GALRLLTMLRPKLITIVEQDLSH-GGGFLARFVDALHYYSALFDALgGDGLGGDSIERHMVEQQLFGCEIRNIVAVGGPKRTG-EEKVERWGHEL 106 5799*******************.678*******************999******************************9665.577******** PP GRAS 320 eeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374 +++GF pv+l + a+qa+lll +++++gy++ ee+g+l lgWkd +L+++SaW+ XP_023924715.1 107 GRVGFCPVSLAGNPAAQASLLLGMFPWKGYTLVEENGCLKLGWKDLSLLTASAWQ 161 ******************************************************6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 164 aa Download sequence |
MHHCLYDITG SDLGALRLLT MLRPKLITIV EQDLSHGGGF LARFVDALHY YSALFDALGG 60 DGLGGDSIER HMVEQQLFGC EIRNIVAVGG PKRTGEEKVE RWGHELGRVG FCPVSLAGNP 120 AAQASLLLGM FPWKGYTLVE ENGCLKLGWK DLSLLTASAW QPAD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G54220.1 | 2e-65 | GRAS family protein |