PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023924698.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family C2H2
Protein Properties Length: 185aa    MW: 20667.8 Da    PI: 6.8864
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023924698.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.90.000332850123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    y C+ C++ Fs+   L  H++ H
  XP_023924698.1 28 YDCTFCKRGFSNAQALGGHMNIH 50
                    88*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 185 aa     Download sequence    
MKSDQPNLEN SEQVNSDDHQ GASQVRSYDC TFCKRGFSNA QALGGHMNIH RKEKAVLKRV  60
VTNKSQPSSN STLPRNSSWP LETKPSSDER NTKKLPWMLA SQQGDRDEIH VGDEYYDQVQ  120
QLPMFVETSS QKDHKPGSRL HSNIEKDLST TSTTHASLGS GIDLELRLGP EPQDPSAPTA  180
TQKFF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G53820.11e-17C2H2 family protein