PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023924576.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | MYB | ||||||||
Protein Properties | Length: 350aa MW: 39243.1 Da PI: 7.5657 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 55.7 | 1.1e-17 | 24 | 71 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT +Ed l+++++ +G g+W++ ar+ g++Rt+k+c++rw++yl XP_023924576.1 24 RGPWTVDEDFTLINYIANHGEGRWNSLARCAGLKRTGKSCRLRWLNYL 71 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 49 | 1.4e-15 | 77 | 120 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T +E++l+++++ ++G++ W++Ia++++ gRt++++k++w++ XP_023924576.1 77 RGNITLQEQLLILELHSRWGNR-WSKIAQHLP-GRTDNEIKNYWRT 120 7899******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 350 aa Download sequence |
MDIKGRGRSM SSTSQIDEDM DLRRGPWTVD EDFTLINYIA NHGEGRWNSL ARCAGLKRTG 60 KSCRLRWLNY LRPDVRRGNI TLQEQLLILE LHSRWGNRWS KIAQHLPGRT DNEIKNYWRT 120 RVQKHAKQLK CDVNSKQFKD TMRYLWMPRL VERIQAATVA PANTSIAATA ATATATTGAC 180 SIGSSTSTKT TTTTTTNNNS NNYHINNNNL DVQTGQAVLP HGVAIGHDFR GAQVTPSYNT 240 PENSSNTGSS DSFGAQVSPV SDLTDYYNIP VNNNLSLECF QASQVGYQDS LTSPSGYFNN 300 GLDFQAMEQS NQWLDGGDTS DNLWNVDDLW FLQQQLNNNN NNNNNNHNNI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G49620.1 | 9e-88 | MYB family protein |