PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023924562.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | MYB | ||||||||
Protein Properties | Length: 300aa MW: 32866.7 Da PI: 8.2293 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 58.5 | 1.5e-18 | 12 | 57 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEde l ++v+++G ++W+ I++ + gR++k+c++rw + XP_023924562.1 12 KGPWSPEEDEMLRKLVQRHGARNWSVISKAIS-GRSGKSCRLRWCNQ 57 79******************************.***********985 PP | |||||||
2 | Myb_DNA-binding | 57.9 | 2.4e-18 | 66 | 108 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++++eEd l+v+a++++G++ W+tIar ++ gRt++ +k++w++ XP_023924562.1 66 AFSAEEDNLIVQAHAKYGNK-WATIARLLN-GRTDNAIKNHWNST 108 79******************.*********.***********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 300 aa Download sequence |
MEATQRDLDR VKGPWSPEED EMLRKLVQRH GARNWSVISK AISGRSGKSC RLRWCNQLSP 60 EVEHRAFSAE EDNLIVQAHA KYGNKWATIA RLLNGRTDNA IKNHWNSTLK RKFSSMSDDT 120 TTTTTTTADE SLNRPRKKSN PGSGSGLYCS PSSPSGSDVS DSGHPAISTE HVTRPVARTG 180 AIFIMPSQQD ESPPPPPPPP PSQNNININI NKNNEPSTLL TLGLPGTSTT TTTTESQTEL 240 TSCDSAPTLR VCDDINHNNN NNKSPPLKKN SDLVSPELLA VMQDMIKIEI KNYMAALLGN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G23290.1 | 1e-64 | MYB family protein |