PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023924474.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

HB-other

Protein Properties

Length: 1182aa MW: 132438 Da PI: 7.5171

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023924474.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	14.3	7.1e-05	5	28	34	57
HHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 34 AkklgLterqVkvWFqNrRakekk 57 A+ lgLt +qV+ WF rR ++k+ XP_023924474.1 5 AAALGLTYKQVRGWFIERRRRDKR 28 899*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1182 aa Download sequence
MEDNAAALGL TYKQVRGWFI ERRRRDKREN GSIVPSHSAS SKKNPILTTT GTIAARKVLK 60 GDPLLHKAKA SFSSIANRPS TVETRIPKRK RKPILLQHLL TSDYILKKVF RKEGPPLGVE 120 FDSLPSRAFC YRTDPKNSHP SCQDNQGAGK RLKVSEQAIL SHQVSNKKRA PAKKHGIGKG 180 LMAPGKKHGI GKGLMAPGKK HGIGKGLMTQ AKKHGIGKGL MTVWRATNPD GGEIPTGIDY 240 TDREVVVSTA PKKPQHRVKR SQQAPVAKQV SLRNKSQDRR KQSTRRREVE HNQDEHLKQP 300 DIVKCELALE GAISRDYLNH VAMFVDDEEL ELQELQAGPN PLRCSDHFAA NGIHGCSLCK 360 DLLAKFPPNS VKMKHPFCTQ PWDSSPEIVK KLFKVFHFLY TYAVAVDICS FTLDEFAQSF 420 HDKDSLLLGK IHVALLKLLI SEVEAELSNG YFPPHLSISC NFLALLHSAE NQKVALEFWK 480 RALNPLTWTE ILRQVLVAAG FGSKQGAMRR EALNKEMNLM VKYGLRPGTL KCELFKILSE 540 QGNNGLKVSE LAKSLPIAEL NIASTTEELE PLICSSLSSD ITLFEKISSS SYRLRISSVA 600 KEVDEFQSDT EDSGSVDDDP NDCGPCSDSD DSGCESGNSN SRNFKYMNHH KSQNNMLIVH 660 NEIDESHPGE VWLLGLMEGE YSDLSIEEKL NALVAITDLL LAGSSFRVED PTQAIAECTP 720 NIHHYGSGAK LKRSSAKQHS IDRPSWGYAG QMHSIQEAYS LFKFHPVDSS VSISKSYEKE 780 RSSGEGENVK EKEVESGLHL MQSVFLGSDR RYNRYWLFLG PCSALGPCSA YDPGHRRVYF 840 ESSEDGHWEV IDTVEDLCAL LSVLDERGKR EAILIESLEK RQAFLLQAMS NKIVKSAGTR 900 HLTQSDQSEL DMVREDSCSP VSDVDNLSLT ETIKDSLPSS GAVVLDVGNK GEEQQERWNR 960 LQEFDSWIWN SFYSNLNAVK HGKRSYLDSL ARCESCHDLY WRDEKHCRIC HTTFELDFDL 1020 EERYAIHEAT CREKEDSEIL FPQHKVLSSQ IQSLKAAIHA IESVMPEEAL VGAWIKSAHK 1080 LWVKRLRRTS SMADLLQVLA DFVGAINEDW LCECNGQQVS FNIIEETIAS FASMPQTSSA 1140 VALWLVELDA LIAPYLEKVR FQKKPEIFTK GRCAPKQSMQ LS

Sequence ? help Back to Top

Protein Sequence Length: 1182 aa Download sequence

MEDNAAALGL TYKQVRGWFI ERRRRDKREN GSIVPSHSAS SKKNPILTTT GTIAARKVLK  60
GDPLLHKAKA SFSSIANRPS TVETRIPKRK RKPILLQHLL TSDYILKKVF RKEGPPLGVE  120
FDSLPSRAFC YRTDPKNSHP SCQDNQGAGK RLKVSEQAIL SHQVSNKKRA PAKKHGIGKG  180
LMAPGKKHGI GKGLMAPGKK HGIGKGLMTQ AKKHGIGKGL MTVWRATNPD GGEIPTGIDY  240
TDREVVVSTA PKKPQHRVKR SQQAPVAKQV SLRNKSQDRR KQSTRRREVE HNQDEHLKQP  300
DIVKCELALE GAISRDYLNH VAMFVDDEEL ELQELQAGPN PLRCSDHFAA NGIHGCSLCK  360
DLLAKFPPNS VKMKHPFCTQ PWDSSPEIVK KLFKVFHFLY TYAVAVDICS FTLDEFAQSF  420
HDKDSLLLGK IHVALLKLLI SEVEAELSNG YFPPHLSISC NFLALLHSAE NQKVALEFWK  480
RALNPLTWTE ILRQVLVAAG FGSKQGAMRR EALNKEMNLM VKYGLRPGTL KCELFKILSE  540
QGNNGLKVSE LAKSLPIAEL NIASTTEELE PLICSSLSSD ITLFEKISSS SYRLRISSVA  600
KEVDEFQSDT EDSGSVDDDP NDCGPCSDSD DSGCESGNSN SRNFKYMNHH KSQNNMLIVH  660
NEIDESHPGE VWLLGLMEGE YSDLSIEEKL NALVAITDLL LAGSSFRVED PTQAIAECTP  720
NIHHYGSGAK LKRSSAKQHS IDRPSWGYAG QMHSIQEAYS LFKFHPVDSS VSISKSYEKE  780
RSSGEGENVK EKEVESGLHL MQSVFLGSDR RYNRYWLFLG PCSALGPCSA YDPGHRRVYF  840
ESSEDGHWEV IDTVEDLCAL LSVLDERGKR EAILIESLEK RQAFLLQAMS NKIVKSAGTR  900
HLTQSDQSEL DMVREDSCSP VSDVDNLSLT ETIKDSLPSS GAVVLDVGNK GEEQQERWNR  960
LQEFDSWIWN SFYSNLNAVK HGKRSYLDSL ARCESCHDLY WRDEKHCRIC HTTFELDFDL  1020
EERYAIHEAT CREKEDSEIL FPQHKVLSSQ IQSLKAAIHA IESVMPEEAL VGAWIKSAHK  1080
LWVKRLRRTS SMADLLQVLA DFVGAINEDW LCECNGQQVS FNIIEETIAS FASMPQTSSA  1140
VALWLVELDA LIAPYLEKVR FQKKPEIFTK GRCAPKQSMQ LS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	21	26	ERRRRD
2	22	27	RRRRDK
3	22	29	RRRRDKRE
4	87	93	PKRKRKP
5	88	112	KRKRKPILLQHLLTSDYILKKVFRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G12750.1	1e-124	HB-other family protein