PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023924292.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | NAC | ||||||||
Protein Properties | Length: 288aa MW: 32922.4 Da PI: 7.0843 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 168.9 | 1.7e-52 | 7 | 131 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeelv++yL++k++++++ + +i+e+d+yk++Pw+Lp k+ +ekewyfFs+rd+ky++g+r+nra+ +gyWkatg dk++ + XP_023924292.1 7 LPPGFRFHPTDEELVMHYLCRKCASQSIAV-PIIAEIDLYKYDPWELPGKALYGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPIGN- 99 79*************************999.88***************7777789*************************************98. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 + vg+kk Lvfy g+ap+gekt+W+mheyrl XP_023924292.1 100 -PKPVGIKKALVFYAGKAPRGEKTNWIMHEYRL 131 .789***************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 288 aa Download sequence |
MSTELVLPPG FRFHPTDEEL VMHYLCRKCA SQSIAVPIIA EIDLYKYDPW ELPGKALYGE 60 KEWYFFSPRD RKYPNGSRPN RAAGTGYWKA TGADKPIGNP KPVGIKKALV FYAGKAPRGE 120 KTNWIMHEYR LADVDRSARK KNSLRLDDWV LCRIYNKKGT LEKQELLNAN NKMHNNSEME 180 DKKPDILNTC ALPPPAALPT AAANEYVYFD TSDSVPRLHT DSSCSEHVVS PEFTCEVQSE 240 PKYWEKNLDF PFNYMDAMDN GFVSQFQGGS SSQMSPLQDM FMYLPKTY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G01720.1 | 1e-139 | NAC family protein |