PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023924211.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | NAC | ||||||||
Protein Properties | Length: 273aa MW: 32230.7 Da PI: 4.0342 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 38.1 | 4.6e-12 | 13 | 137 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkk.....leleevikevdiykv.ePwdLpkkvkaeek...ewyfFskrdkkyatgkrknratksgyWkatg 87 p+++F P+++el+ +yL+ kv g++ +e+ +++++d+++v eP ++ ++ +e++ ++yfF++++ +++ + W+ XP_023924211.1 13 LPCVKFCPNEDELIYYYLHLKVIGEPlslggVEV-VHVPKFDVFRVkEPDKIWDMIWGEDSapdRVYFFTTASAAQS--------LLETCWRYEA 98 689***********************55433333.2599999999879*99974443433335588***99987653........3456799887 PP NAM 88 kdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 + + ++++ +g + +k+ + + ++ ++++ W+m+ey+l XP_023924211.1 99 S-EVIYDEnTGYPIAIKRQFYYE--NHDSPQHGYWIMNEYSL 137 7.455554377789999998766..4555569********98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 273 aa Download sequence |
MKVYFPPFSS LMLPCVKFCP NEDELIYYYL HLKVIGEPLS LGGVEVVHVP KFDVFRVKEP 60 DKIWDMIWGE DSAPDRVYFF TTASAAQSLL ETCWRYEASE VIYDENTGYP IAIKRQFYYE 120 NHDSPQHGYW IMNEYSLDVE DEIDQNETTA FFDEYQNKTT TYFEEYQNET TVSFDEDQNE 180 TTTYFNEYQN ETTVSFDEDQ NETTTYFYEY QNETNSKKLP ISVFVPFELL YADKEDNSGK 240 SFSNVLSFLV FVKHLVYVGH HTLVPQINVL LEC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G79580.1 | 5e-09 | NAC family protein |