PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023924196.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family ERF
Protein Properties Length: 146aa    MW: 16391.8 Da    PI: 10.5937
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023924196.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP267.33e-213181155
             AP2  1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    ++y+GVr ++ +gr++AeIrd ++    ++r +lg+f+taeeAa a+++a+++l+g
  XP_023924196.1 31 THYRGVRKRP-WGRFAAEIRDpWK----KTRKWLGTFDTAEEAALAYDEAALSLRG 81
                    68********.**********883....5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 146 aa     Download sequence    
MPATASVDAL PLLRLDSSSV ATTRPPPKHQ THYRGVRKRP WGRFAAEIRD PWKKTRKWLG  60
TFDTAEEAAL AYDEAALSLR GSKAKTNFGF ILPPPSPPPP VRSEYRGYKM ENLAVMTTQT  120
QHDTKTSSSP EKRPFLFDLN LPAPLF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28360.12e-22ERF family protein