PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023924099.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | MYB | ||||||||
Protein Properties | Length: 292aa MW: 33092.4 Da PI: 8.9786 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 50.7 | 4.2e-16 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+ Ed ll ++++ +G g+W++ +++ g+ R++k+c++rw +yl XP_023924099.1 14 RGPWTPREDTLLTKYIQAHGEGHWRSMPKKAGLLRCGKSCRLRWMNYL 61 89******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 54.2 | 3.4e-17 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ T++Ed+l+++++++lG++ W++Ia +++ gRt++++k++w+++l XP_023924099.1 67 RGNITPDEDDLIIRLHALLGNR-WSLIAGRLP-GRTDNEIKNYWNTHL 112 7999******************.*********.************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 292 aa Download sequence |
MGRAPCCSKV GLHRGPWTPR EDTLLTKYIQ AHGEGHWRSM PKKAGLLRCG KSCRLRWMNY 60 LRPDIKRGNI TPDEDDLIIR LHALLGNRWS LIAGRLPGRT DNEIKNYWNT HLSKRLISEG 120 TDPNTHKKLL DPLKELKRRK NNKSKSKSNN RNMQKNKSKS VANVGPEKPK VHLPKPVRVT 180 SFSLRRNDSF DWNVFSGSSG PEIKGGYVGS EMVNDVNPWC NFKDGENGVG VGFLDGDEDD 240 RDDLVNGSDF ECQSDLPSGD NSLAKLYEEY LDLLKMEETQ VDLDNFAESL LV |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 133 | 139 | LKELKRR |
2 | 134 | 140 | KELKRRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G13540.1 | 4e-68 | MYB family protein |