PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023923893.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | C2H2 | ||||||||
Protein Properties | Length: 189aa MW: 19865 Da PI: 5.3777 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 14.6 | 9.7e-05 | 163 | 186 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23 ++C+ C+k+F + L++H + H XP_023923893.1 163 FSCQTCSKTFGSEVGLQSHTMAkH 186 89*****************98766 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 189 aa Download sequence |
MCSVILELEF EAQSGDLLLG FFDPLGGTDE GTTAVEAEVG GPTSIVAMKR ALMRDVVLAK 60 RGQTKDEDDD DISGDEDMSF GSAEDDDEPK ETPKNVESSK KRPSESATKT AVPAKKAKVA 120 TAQKTDGKKV GGHTTPHPSK KAAKTPTTSE QSKQKSPKSG GSFSCQTCSK TFGSEVGLQS 180 HTMAKHAGD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G03740.1 | 3e-07 | C2H2 family protein |