PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023923447.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family MYB_related
Protein Properties Length: 309aa    MW: 35574.4 Da    PI: 10.8151
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023923447.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding54.33.2e-172471148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg+WT+eEde+l +++k+ G g+W+t +++ g+ R++k+c++rw +yl
   XP_023923447.1 24 RGPWTPEEDEILSNYIKREGEGRWRTLPKRAGLLRCGKSCRLRWMNYL 71
                     89******************************99************97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    
MRNPSSGGGS TSKTPCCSKV GIKRGPWTPE EDEILSNYIK REGEGRWRTL PKRAGLLRCG  60
KSCRLRWMNY LRPSVKRGRI APDEEDLILR LHRLLGNRIV SKVLANRLKK ILPHIISMSQ  120
SAFLPDRLIT DNDYELALGQ KMNRDKTSLF FSRNTHIETQ DSIKELFRAQ VIRQHEQYLG  180
LPSLVGRGTK KAFNKIKDQV GKRIADWKEK LHSSVGRETH IKAVAQATLT YSMSCFKLLD  240
SLCKELGAMI SQFWWGKKEE RKILWIAWDT LCKSKADGGM RFKDLKAFNL ALLAEQGRRL  300
RHNQNTLFH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13540.12e-44MYB family protein