PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023923447.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | MYB_related | ||||||||
Protein Properties | Length: 309aa MW: 35574.4 Da PI: 10.8151 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 54.3 | 3.2e-17 | 24 | 71 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+eEde+l +++k+ G g+W+t +++ g+ R++k+c++rw +yl XP_023923447.1 24 RGPWTPEEDEILSNYIKREGEGRWRTLPKRAGLLRCGKSCRLRWMNYL 71 89******************************99************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 309 aa Download sequence |
MRNPSSGGGS TSKTPCCSKV GIKRGPWTPE EDEILSNYIK REGEGRWRTL PKRAGLLRCG 60 KSCRLRWMNY LRPSVKRGRI APDEEDLILR LHRLLGNRIV SKVLANRLKK ILPHIISMSQ 120 SAFLPDRLIT DNDYELALGQ KMNRDKTSLF FSRNTHIETQ DSIKELFRAQ VIRQHEQYLG 180 LPSLVGRGTK KAFNKIKDQV GKRIADWKEK LHSSVGRETH IKAVAQATLT YSMSCFKLLD 240 SLCKELGAMI SQFWWGKKEE RKILWIAWDT LCKSKADGGM RFKDLKAFNL ALLAEQGRRL 300 RHNQNTLFH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G13540.1 | 2e-44 | MYB family protein |