PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_023923408.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
|
||||||||
Family | C2H2 | ||||||||
Protein Properties | Length: 241aa MW: 25868.6 Da PI: 9.2676 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 12.4 | 0.00049 | 186 | 203 | 5 | 21 |
TTT.EEESSHHHHHHHHH CS zf-C2H2 5 dCg.ksFsrksnLkrHir 21 C+ + Fs+ snL rH+r XP_023923408.1 186 GCNgRQFSTFSNLLRHQR 203 8999*************9 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 241 aa Download sequence |
MDHNYIPPMR VSQAPAPGNP SAYGATSSSS PALYQSRLDA SAAARRHSEM PRSSINPSYE 60 DHYRRISTPY EQHSSANAYS LAPGQNIPSI SGLTQNPSMT SSSGSPAMSQ HAVRSPNTYE 120 ASMYTQAYSA TPQSTQMYEP SAQAMGYPSP YMGSSVNPVA SKPSGNDPSS IRVLNQRPKP 180 QCWEHGCNGR QFSTFSNLLR HQREKSGTAS KSSCPRCGAG QYLSPPCRAL LVSISGVVPE 240 S |