PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023923279.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family MYB_related
Protein Properties Length: 302aa    MW: 33485.5 Da    PI: 10.1631
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023923279.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding36.98.4e-12555146
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqk 46
                     +++WT+eE+  l+ +v ++G g W+tI +          R+  ++k++w++
   XP_023923279.1  5 KQKWTQEEEAALKAGVIKHGAGKWRTILKDPEfsgvlYLRSNVDLKDKWRN 55
                     79***********************************88***********9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    
MGAPKQKWTQ EEEAALKAGV IKHGAGKWRT ILKDPEFSGV LYLRSNVDLK DKWRNMSVMA  60
NGWGSREKAR LAVKRVPHIP KQEENSMALG NVVQSDEEMM DTKPLSVSSE TAQVATPKRS  120
IVRLDNLIFE AITNLKEPGG SNKTNIATYI EEQYWAPPDF KRLLSAKLKY LTANGKLIKV  180
KRRYRIAPTP AFSDRRRISS MLPPEGRQRV FPKVEKDDAH IFSKTQIDID LAKMRTMTAQ  240
EAAVAAAEAV AEAEAAIAEA EEAAREAELA EADAEAAQAF AAAAVKTLKG RNNPKMVQMI  300
RA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49950.11e-106MYB_related family protein