PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023923248.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | MYB | ||||||||
Protein Properties | Length: 216aa MW: 24703.9 Da PI: 8.8194 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 56.1 | 8.3e-18 | 9 | 56 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT eEd +l d ++ +G+g W++Ia++ g++R++k+c++rw +yl XP_023923248.1 9 KGPWTVEEDRILMDHIRVHGKGKWNRIAKMTGLKRCGKSCRLRWINYL 56 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 59.5 | 7.2e-19 | 62 | 107 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg +++eE++l+++++++lG++ W++Ia +++ gRt++q+k++w+++l XP_023923248.1 62 RGDFSEEEEDLIIRLHNLLGNR-WSLIAGRVP-GRTDNQVKNHWNTHL 107 899*******************.*********.************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 216 aa Download sequence |
MESKNEHRKG PWTVEEDRIL MDHIRVHGKG KWNRIAKMTG LKRCGKSCRL RWINYLSPGV 60 KRGDFSEEEE DLIIRLHNLL GNRWSLIAGR VPGRTDNQVK NHWNTHLCKK LGIKKGKTKV 120 GSSLQSFSTK RGNNPTSVSS EPNFEPPSNC NSETEAKTAT EGDSQSMCKF ASTQEATTED 180 NYERSFWLSK DDLNLLTPFL LEPLNSYSLD FVWDCL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G14750.1 | 1e-64 | MYB family protein |