PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023923147.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | LFY | ||||||||
Protein Properties | Length: 245aa MW: 27540.8 Da PI: 8.5861 | ||||||||
Description | LFY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FLO_LFY | 431.1 | 1e-131 | 4 | 231 | 147 | 386 |
FLO_LFY 147 eglseepvqeekeaagsggeglgeaelvaaeekkseeekkkaskkkqkrkkkkelkseededeeeeededeegsgedgeerqrehPfivtepgev 241 glseepvq+ekea+gsgg+g ++e+va ++k+ ++rk +++++ +++d+e d+d++ +g+ g+erqrehPfivtepgev XP_023923147.1 4 TGLSEEPVQQEKEAVGSGGGG--TWEAVAGGG------RRKQ----RRRKGQRKVVDVDHDDNELGADHDDDMNGNVGSERQREHPFIVTEPGEV 86 69***************9999..999999873......2333....2333333434445566667778888889999****************** PP FLO_LFY 242 argkknGLDYLfdLyeqCrefLlqvqkiakerGekcPtkvtnqvfryakkagasyinkPkmrhYvhCYalhcLdeeasnalrrafkergenvGaw 336 argkknGLDYLf+LyeqCr+fL+qvq+iakerGekcPtkvtnqvfr+akkagasyinkPkmrhYvhCYalhcLdeeasnalrr fkergenvGaw XP_023923147.1 87 ARGKKNGLDYLFHLYEQCRDFLIQVQNIAKERGEKCPTKVTNQVFRFAKKAGASYINKPKMRHYVHCYALHCLDEEASNALRRGFKERGENVGAW 181 *********************************************************************************************** PP FLO_LFY 337 rqacykplvaiaarqgwdidavfnahprLsiWYvPtkLrqLChlerskas 386 rqacy+plvaiaarqgwdida+fnahprLs+WYvPtkLrqLCh+er++a+ XP_023923147.1 182 RQACYNPLVAIAARQGWDIDAIFNAHPRLSVWYVPTKLRQLCHAERNHAT 231 **********************************************9876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 245 aa Download sequence |
MAWTGLSEEP VQQEKEAVGS GGGGTWEAVA GGGRRKQRRR KGQRKVVDVD HDDNELGADH 60 DDDMNGNVGS ERQREHPFIV TEPGEVARGK KNGLDYLFHL YEQCRDFLIQ VQNIAKERGE 120 KCPTKVTNQV FRFAKKAGAS YINKPKMRHY VHCYALHCLD EEASNALRRG FKERGENVGA 180 WRQACYNPLV AIAARQGWDI DAIFNAHPRL SVWYVPTKLR QLCHAERNHA TASSSVSGGA 240 DHMPF |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 34 | 41 | RRKQRRRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G61850.1 | 1e-114 | LFY family protein |