PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023922955.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family B3
Protein Properties Length: 318aa    MW: 36691.1 Da    PI: 9.2931
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023922955.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B358.41.3e-181398899
                    -HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
              B3  8 sdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99
                    ++ l+ g l +p+kf++++g++   s    l+ +sg +W+v+l  + ++g+++l+kGW eF+k   +keg f+vF+++g+s f  +v +f++
  XP_023922955.1 13 NNCLRDGKLGIPRKFTRKYGQE--LSNFAFLKLPSGAEWNVEL--TESDGEVWLQKGWPEFAKYYSVKEGHFLVFRYEGNSHF--CVLIFDE 98
                    56778899***********855..888899999**********..**********************************9999..9999986 PP
2B351.71.6e-16214307298
                     EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE...EEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE.. CS
              B3   2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr...yvltkGWkeFvkangLkegDfvvFkldgr.sefel 92 
                     fkv ++ ++l ++ l +pk+f+++++++   + ++ l  ++g  W v+++  k+ ++   + +   Wk F+k+n+L++gD++ F+l++  ++f  
  XP_023922955.1 214 FKVVIQQSYLDRN-LNIPKDFVKKYSNI--LHGDVNLWVSDGSNWPVEFC--KRTDEnlkCRFNCRWKAFAKDNNLEVGDVCAFELIEAtKTF-- 301
                     7999999999999.***********877..55589**************4..4444445799999**********************865666.. PP

                     EEEEE- CS
              B3  93 vvkvfr 98 
                     +v +fr
  XP_023922955.1 302 KVVIFR 307
                     888887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    
MANAPHFFKI VLNNCLRDGK LGIPRKFTRK YGQELSNFAF LKLPSGAEWN VELTESDGEV  60
WLQKGWPEFA KYYSVKEGHF LVFRYEGNSH FCVLIFDESA TEIDYHFNTS HRGKGKLHNE  120
LIAPNMEEIE SYSAIEFLGS FPPSPKTRDK SPLPYFQPHK IMKTNSSAKG VKGISTTKQC  180
LKSKAVRMIQ PLNNNEIARA LQRASAFKPK NPYFKVVIQQ SYLDRNLNIP KDFVKKYSNI  240
LHGDVNLWVS DGSNWPVEFC KRTDENLKCR FNCRWKAFAK DNNLEVGDVC AFELIEATKT  300
FKVVIFRVNE ENCRALYC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.13e-46B3 family protein