PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023922783.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

ARR-B

Protein Properties

Length: 581aa MW: 65833.8 Da PI: 5.0714

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023922783.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	77.3	2e-24	195	248	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k r++W+ +LH++Fv+av+q+ G +k Pk+il+lm+v+ Lt+e+v+SHLQkYRl XP_023922783.1 195 KHRVVWSVDLHQKFVKAVNQI-GFDKVGPKKILDLMNVQWLTRENVASHLQKYRL 248 68*****************.9*****************************8 PP
2	Myb_DNA-binding	39	1.9e-12	197	247	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ ++++++v+av+q G + +k+I m+ + +t++++ s++qky+ XP_023922783.1 197 RVVWSVDLHQKFVKAVNQIGFDkvGPKKILDLMNvQWLTRENVASHLQKYR 247 678***********************************************7 PP
3	Response_reg	83	9.2e-28	19	127	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl+vdD+p+ +++l+++l+k y +v+++ ++eal+ll+e++ +D+++ D++mp+mdG++ll++ e +lp+i+++ ge + + + ++ G XP_023922783.1 19 VLVVDDDPTWLKILEKMLKKCAY-DVTTCHLAREALNLLRERKdgYDIVISDVNMPDMDGFKLLEHVGLEM-DLPVIMMSVDGETSKVMKGVQHG 111 89*******************.***********999999******************6644.8****************** PP ESEEEESS--HHHHHH CS Response_reg 94 akdflsKpfdpeelvk 109 a d+l Kp+ ++el++ XP_023922783.1 112 ACDYLLKPIRMKELRN 127 ***********987 PP

Sequence ? help Back to Top
Protein Sequence Length: 581 aa Download sequence
MENGFSSPRS ESFPAGLRVL VVDDDPTWLK ILEKMLKKCA YDVTTCHLAR EALNLLRERK 60 DGYDIVISDV NMPDMDGFKL LEHVGLEMDL PVIMMSVDGE TSKVMKGVQH GACDYLLKPI 120 RMKELRNIWQ HVFRKKIHEI RDIEHENIDI IQMSRNGSDL SDDGQMYCGE DYNSKKRKDF 180 DKNDDKDFGD HSTKKHRVVW SVDLHQKFVK AVNQIGFDKV GPKKILDLMN VQWLTRENVA 240 SHLQKYRLYL SRLQKENDLK ASFGGIKHSD FPPKDPAASY GHQSSISLNQ NDVANGYQFC 300 GSNFIAQDAD TKNHEGDLKI VSEMTEIKRT LTADVSDPQK ARSSKSFGHS FAPLETEASY 360 PAFDSTNPPE FSWRENTETQ VKKELKPHLQ LEDGYSQLPP HGPQHQIQMN QLQSDPEDTS 420 VLSLTGRDIS GSMEIKPLFT EFKSKHVSHV SPTESAIDTF PVQTKSQLIN HQSFEPISTV 480 ISSTKPQGFN LSITDLESSQ SNLTSASDPN FAPINEDLTV WLQGDYYSRN FGQSIDFIDY 540 DDPGFLAEVP FYLYDPLTAD FQCPIDSTTE CPIVDQGLFI A

Sequence ? help Back to Top

Protein Sequence Length: 581 aa Download sequence

MENGFSSPRS ESFPAGLRVL VVDDDPTWLK ILEKMLKKCA YDVTTCHLAR EALNLLRERK  60
DGYDIVISDV NMPDMDGFKL LEHVGLEMDL PVIMMSVDGE TSKVMKGVQH GACDYLLKPI  120
RMKELRNIWQ HVFRKKIHEI RDIEHENIDI IQMSRNGSDL SDDGQMYCGE DYNSKKRKDF  180
DKNDDKDFGD HSTKKHRVVW SVDLHQKFVK AVNQIGFDKV GPKKILDLMN VQWLTRENVA  240
SHLQKYRLYL SRLQKENDLK ASFGGIKHSD FPPKDPAASY GHQSSISLNQ NDVANGYQFC  300
GSNFIAQDAD TKNHEGDLKI VSEMTEIKRT LTADVSDPQK ARSSKSFGHS FAPLETEASY  360
PAFDSTNPPE FSWRENTETQ VKKELKPHLQ LEDGYSQLPP HGPQHQIQMN QLQSDPEDTS  420
VLSLTGRDIS GSMEIKPLFT EFKSKHVSHV SPTESAIDTF PVQTKSQLIN HQSFEPISTV  480
ISSTKPQGFN LSITDLESSQ SNLTSASDPN FAPINEDLTV WLQGDYYSRN FGQSIDFIDY  540
DDPGFLAEVP FYLYDPLTAD FQCPIDSTTE CPIVDQGLFI A

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67710.1	1e-111	ARR-B family protein