PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023922672.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | ERF | ||||||||
Protein Properties | Length: 238aa MW: 26366.9 Da PI: 4.6549 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 54.2 | 3.6e-17 | 25 | 75 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s++kGVr +k +g++v+eIr p++ r r++lg++++ae+Aa+a +aa +l+g XP_023922672.1 25 SKFKGVRKRK-WGKYVSEIRLPNS---RERIWLGSYDSAEKAARAFDAALFCLRG 75 79*****999.**********933...5*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 238 aa Download sequence |
MVKQNIEKLT KTTATIEEQR SESNSKFKGV RKRKWGKYVS EIRLPNSRER IWLGSYDSAE 60 KAARAFDAAL FCLRGRTAKF NFPNNPPEIP GGRSLKAAEI QTAAARFANS ESSAPPKSES 120 NSGHHLEMNN NNNNNSSSSF IPSPSVSEAT VETVQIDSDS ISTNNLDGSF LDFDLDLDLD 180 FLKTMGSINY GSDYGIFPGF DDLTNGLFTQ PLSNVDYGEE NLDGIASQES YNSFLWNF |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 28 | 34 | KGVRKRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G19210.1 | 2e-54 | ERF family protein |