PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023922392.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | MYB_related | ||||||||
Protein Properties | Length: 232aa MW: 25667.1 Da PI: 10.3105 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 43 | 1e-13 | 44 | 88 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+ ++ + k+lG+g+W+ I++++ ++R++ q+ s+ qky XP_023922392.1 44 PWTEEEHVVFLAGLKKLGKGDWRGISKKFVTTRSPSQVASHAQKY 88 8*******************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 232 aa Download sequence |
MKKSFSTGNL SSKKINDDEA NTGYLSDGIV QRKAVDRERK KGTPWTEEEH VVFLAGLKKL 60 GKGDWRGISK KFVTTRSPSQ VASHAQKYFL RQAAIDKKKR RPSVFDLSLN EYEITPKDSP 120 VSQTKKSDGE RSSEATAAVQ NVNRFPHVCI DIPPSAQMSP LISGAPNYSW CPSMVGMPGN 180 EQFIPTVNFA RQSFPSYSWL PGTQRNFGTC APVITHPSGI PSPKSFPHSL SH |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 97 | 101 | KKKRR |
2 | 97 | 102 | KKKRRP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G61620.1 | 2e-41 | MYB_related family protein |