PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023922390.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family ERF
Protein Properties Length: 305aa    MW: 33440.4 Da    PI: 7.9819
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023922390.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2636.4e-20144194255
             AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+++AeIrdp   + k  r++lg+f+ta +Aaka+++a+ kl+g
  XP_023922390.1 144 HYRGVRRRP-WGKFAAEIRDP---NrKGSRVWLGTFDTAIDAAKAYDRAAFKLRG 194
                     8********.**********9...6566*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    
MASIDESSTL ELIREHLLND FASMESFITN LNHSISNNIS QSQSNQIEST NTEIEISDYL  60
LPKEEPIITY PSNNSNLETK PTTLHSSKPP KGPKASNLSH RRPSLNVAIP PPTTTTFVGP  120
NSSQPMLVTT SKLNVSDSCN ESKHYRGVRR RPWGKFAAEI RDPNRKGSRV WLGTFDTAID  180
AAKAYDRAAF KLRGSKAILN FPQEAGNSSS EFDVADTADV CIGKKRNREC ESEEKKEMKK  240
EKIIKAESVS LSSSSSSSSS STVCPLTPSS WTGVWDFDGK GIFSVPPLSP LSPHPSMGYS  300
QLIVT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51190.13e-30ERF family protein