PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023922129.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | DBB | ||||||||
Protein Properties | Length: 187aa MW: 20507.1 Da PI: 6.6556 | ||||||||
Description | DBB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-B_box | 20.3 | 1.2e-06 | 4 | 33 | 5 | 34 |
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeH 34 C+ +e + fC ++ lC++C ++ H XP_023922129.1 4 LCDACEGAAAVVFCAADEAALCHSCDEKVH 33 7******99******************998 PP | |||||||
2 | zf-B_box | 28.7 | 2.7e-09 | 53 | 91 | 3 | 37 |
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg....H 37 ++C+ +e+ ++ ++Ce +++ lC +C + H g H XP_023922129.1 53 VPRCDICENAPAFFYCEVDGSSLCLQCDMIVHVGgkrtH 91 689**************************9996545555 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 187 aa Download sequence |
MRTLCDACEG AAAVVFCAAD EAALCHSCDE KVHMCNKLAS RHVRVGLANP SAVPRCDICE 60 NAPAFFYCEV DGSSLCLQCD MIVHVGGKRT HGRYLLLRQR VEFPGDKPGH IEEPASQPVD 120 QGETRRVQNQ PPKLTVVENQ QNHSVSPVPA SDANADGHAK NKKDTKMIDL NINPQRMHEH 180 GSNNQDQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38960.1 | 3e-66 | DBB family protein |