PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023921848.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family MYB_related
Protein Properties Length: 367aa    MW: 39284.7 Da    PI: 7.2238
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023921848.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding41.72.7e-13124168347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+ l++ + ++lG+g+W+ Iar +   Rt+ q+ s+ qky
   XP_023921848.1 124 PWTEEEHRLFLLGLQKLGKGDWRGIARNFVMSRTPTQVASHAQKY 168
                      8*****************************99************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 367 aa     Download sequence    
MTRRCSHCSN NGHNSRTCPN RGGGGGGSGG GGGGGGVGGS GGGLRLFGVR LTDGSMIKKS  60
ASMGNLSSAH YHSSSSAAAS PNNNQHDSPS SDPHVHVSDG YLSDDPTHAS CSTNRRGDRK  120
KGVPWTEEEH RLFLLGLQKL GKGDWRGIAR NFVMSRTPTQ VASHAQKYFI RQTNANRRKR  180
RSSLFDMVPD MSTDTPSVPE EQVLLPSAQA RETDTANPLP SLNLSLNSEF EPMEAIPQEE  240
AKESDESVTG SGGMAPMIPE FFPAFLTLPF PMWQPNTAPV EEEKGAETSH HQVLKPIPIL  300
PKEPVNVDEL VGLSQLSLRE AERLHREPSP LSLKLIGTPS RQSAFHANAP VSGSDLNKGE  360
SSVIQAV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16350.13e-93MYB_related family protein