PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023921729.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family MYB
Protein Properties Length: 346aa    MW: 39032.9 Da    PI: 5.972
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023921729.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding55.61.2e-171461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd +l+ +++++G+g+W+  ++  g+ R++k+c++rw +yl
   XP_023921729.1 14 KGPWTPEEDHKLISYIQLHGPGNWRNLPKNAGLQRCGKSCRLRWTNYL 61
                     79********************************************97 PP

2Myb_DNA-binding53.27.1e-1767111147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      rgr++ eE+e  ++++  lG++ W++Ia++++ gRt++++k++w+++
   XP_023921729.1  67 RGRFSFEEEETVIQLHSILGNK-WSAIAARLP-GRTDNEIKNYWNTH 111
                      89********************.*********.************97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 346 aa     Download sequence    
MGRAPCCDKA GLKKGPWTPE EDHKLISYIQ LHGPGNWRNL PKNAGLQRCG KSCRLRWTNY  60
LRPDIKRGRF SFEEEETVIQ LHSILGNKWS AIAARLPGRT DNEIKNYWNT HIRKRLLRMG  120
IDPVTHAPRL DLLDLSSILS STLCNQSILN MSNLLGTQAL MNPELLRLAT TILSLKQESQ  180
APFPQNLQEN QLCNFLLQNQ AQPLQPNQYQ APIQEGFSSE ESNQLTQANV EGFLSKVATF  240
GNSQENSIAS NLNEDFVCQP NYMYCGSNPI VPYLVENPNF QSLNNSYQNF SSFDSVVSTP  300
KSSPTPLNSS STFINSCTED ERDSHCSNLL KFEIPESLDI DEFMSI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G05100.13e-92MYB family protein