PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023921632.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

MYB

Protein Properties

Length: 524aa MW: 57531.2 Da PI: 5.685

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023921632.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	57.2	3.9e-18	40	87	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT Ed +lv++vk++G g+W+++ ++ g+ R++k+c++rw ++l XP_023921632.1 40 KGPWTSAEDAILVEYVKKHGEGNWNAVQKHSGLSRCGKSCRLRWANHL 87 79******************************************9986 PP
2	Myb_DNA-binding	42.3	1.8e-13	93	136	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g + +eE+ +++++++++G++ W++ a++++ gRt++++k++w++ XP_023921632.1 93 KGGFNPEEECRIIELHAMMGNK-WARMAAELP-GRTDNEIKNYWNT 136 57799***************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 524 aa Download sequence
MMGATNDSEK RKISKGRRDL ASIQEACAGG SLGVGGGLKK GPWTSAEDAI LVEYVKKHGE 60 GNWNAVQKHS GLSRCGKSCR LRWANHLRPD LKKGGFNPEE ECRIIELHAM MGNKWARMAA 120 ELPGRTDNEI KNYWNTRIKR LQRAGVPIYP PEVCLQVLNG SQDNQKSTLP TGDANHHDHL 180 QGDDLEIPDV KFKDLDLDRE YLSYSPKLLD IPASSLLKQG IGSSRPYNFT IPTIYPFKRL 240 RESETMFPGP DVSVSGALPV FNHYMDNTYE NLAEPFNLPF ITFPDHNTND QLPSGVLPGS 300 HALLNGNSSS SKPISEAMKL ELPSLQYSET QPGSWGTPAS PLPSLESVDS FIQSPPTEQT 360 HSDCLSPRSS GLLEAILYES QTLKGSKNSP QQTSDTSVMP ADVVESSPVN PCKTKWEAHH 420 EPNSPLGHSA ASVFSEYTPL SGSSMDEHQS VETVLGCSSM PETVNQDRTH YVIKKEISTQ 480 GDFTRPDALL DLGWFGHINE HGKDQSTLTD AIGALLGEEY SSGY

Sequence ? help Back to Top

Protein Sequence Length: 524 aa Download sequence

MMGATNDSEK RKISKGRRDL ASIQEACAGG SLGVGGGLKK GPWTSAEDAI LVEYVKKHGE  60
GNWNAVQKHS GLSRCGKSCR LRWANHLRPD LKKGGFNPEE ECRIIELHAM MGNKWARMAA  120
ELPGRTDNEI KNYWNTRIKR LQRAGVPIYP PEVCLQVLNG SQDNQKSTLP TGDANHHDHL  180
QGDDLEIPDV KFKDLDLDRE YLSYSPKLLD IPASSLLKQG IGSSRPYNFT IPTIYPFKRL  240
RESETMFPGP DVSVSGALPV FNHYMDNTYE NLAEPFNLPF ITFPDHNTND QLPSGVLPGS  300
HALLNGNSSS SKPISEAMKL ELPSLQYSET QPGSWGTPAS PLPSLESVDS FIQSPPTEQT  360
HSDCLSPRSS GLLEAILYES QTLKGSKNSP QQTSDTSVMP ADVVESSPVN PCKTKWEAHH  420
EPNSPLGHSA ASVFSEYTPL SGSSMDEHQS VETVLGCSSM PETVNQDRTH YVIKKEISTQ  480
GDFTRPDALL DLGWFGHINE HGKDQSTLTD AIGALLGEEY SSGY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G11440.1	9e-98	MYB family protein