PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023921564.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

C2H2

Protein Properties

Length: 170aa MW: 19197.6 Da PI: 10.1787

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023921564.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	10.9	0.0014	41	63	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C++ F++ L H +H XP_023921564.1 41 FECKTCNRQFPSFQALGGHRASH 63 89**********99999998887 PP
2	zf-C2H2	11.6	0.00084	89	111	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg F L H+r+H XP_023921564.1 89 HECSICGLEFAMGQALGGHMRRH 111 78********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 170 aa Download sequence
MAMKRMREDD GIESLDMANC LMLLSHSLET KTRKASRADV FECKTCNRQF PSFQALGGHR 60 ASHKRPKLMG EELKERTKSQ NLVNKPKMHE CSICGLEFAM GQALGGHMRR HRAMMDGAFS 120 SAAIEKKVPV LKRSNSTRVM CLDLNLTPLE NDLKLLFGKK APQIDFTLMV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37430.1	4e-48	C2H2 family protein