PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023921420.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family HD-ZIP
Protein Properties Length: 293aa    MW: 33083.3 Da    PI: 7.7465
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023921420.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox598e-19129183256
                     T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     rk+ +++k+q  +Lee F+++++++ +++  LAk+lgL  rqV vWFqNrRa+ k
  XP_023921420.1 129 RKKLRLSKDQSAVLEESFKEHNTLNPKQKLALAKQLGLRPRQVEVWFQNRRARTK 183
                     788899***********************************************98 PP
2HD-ZIP_I/II129.81.1e-41129218191
     HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 
                     +kk+rlsk+q+++LEesF+e+++L+p++K +la++Lgl+prqv+vWFqnrRARtk+kq+E+d+e+Lkr++++l++en+rL+kev+eLr +l
  XP_023921420.1 129 RKKLRLSKDQSAVLEESFKEHNTLNPKQKLALAKQLGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTDENRRLQKEVQELR-AL 218
                     69*************************************************************************************9.55 PP
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    
MMVEKEDLGL SLSLTSTQNH HSLHLNLMPS LVPSSGFNPK PSWNEAFPSS DRNSETCRAE  60
TRSFLRGIDV NRLPSTADCE EEAGVSSPNS TLSSVSGKRS EREAHCEELD IERACSRVIS  120
DEEDGETSRK KLRLSKDQSA VLEESFKEHN TLNPKQKLAL AKQLGLRPRQ VEVWFQNRRA  180
RTKLKQTEVD CEFLKRCCEN LTDENRRLQK EVQELRALKL SPQFYMQMTP PTTLTMCPSC  240
ERVGVPPSSS STVDARSHQM GPTHQRPIPI NPWAPTPSSI PHRPFDAVLH PRS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1128134SRKKLRL
2178186RRARTKLKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16780.11e-105HD-ZIP family protein