PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023921416.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | SBP | ||||||||
Protein Properties | Length: 179aa MW: 20259.5 Da PI: 8.8196 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 133.1 | 9.3e-42 | 70 | 144 | 2 | 76 |
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkk 76 Cq+e+C adl++ak+yhrrhkvCe hska+vv+v+g++qrfCqqCsrfh+lsefDe+krsCr rLa+hnerrrk XP_023921416.1 70 CQAEKCGADLTDAKRYHRRHKVCELHSKASVVIVAGQRQRFCQQCSRFHDLSEFDEAKRSCRVRLAGHNERRRKV 144 *************************************************************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 179 aa Download sequence |
MEARSFEGKR TFKEKVYKEV EEDVDDDLDE EEGGGEMMSF ADNERKRAVA VFSGKRGTSG 60 GAGGVSPPSC QAEKCGADLT DAKRYHRRHK VCELHSKASV VIVAGQRQRF CQQCSRFHDL 120 SEFDEAKRSC RVRLAGHNER RRKVGYQSKE TQSRQTDDHS GRIQVTIPGN SSYKQLQIR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G53160.1 | 2e-30 | SBP family protein |