PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023921089.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

NAC

Protein Properties

Length: 449aa MW: 50600.4 Da PI: 7.0578

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023921089.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	115.7	4.8e-36	46	188	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkklelee.......vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk........ 79 lp+G++F+Ptd+el+ e+L++kve+k+++ + +i+ +i++++P++Lp v+ + + +fF++ +k+y+tg+rk+r+++ XP_023921089.1 46 LPAGVKFDPTDQELI-EHLEAKVEAKDMKSHPlidefipTIEGEdGICYTHPEKLP-GVTRDGLSRHFFHRPSKAYTTGTRKRRKIQtecdlqgg 138 799**********.99*****5553344444434666646******.555666799**************73334555544 PP NAM 80 sgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 + +W++tgk+++v++ +g+++g+kk+Lv+y g+++k+ekt+Wvmh+y+l XP_023921089.1 139 ETRWHKTGKTRPVMV-NGKQKGCKKILVLYtnFGKNRKPEKTNWVMHQYHL 188 778********.999*******5547999999*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 449 aa Download sequence
MNKSSLGSIS SSDLIDAKLE EHQMCGSKHC PGCGHKLEGK PDWLGLPAGV KFDPTDQELI 60 EHLEAKVEAK DMKSHPLIDE FIPTIEGEDG ICYTHPEKLP GVTRDGLSRH FFHRPSKAYT 120 TGTRKRRKIQ TECDLQGGET RWHKTGKTRP VMVNGKQKGC KKILVLYTNF GKNRKPEKTN 180 WVMHQYHLGQ HEEEKEGELV VSKIFYQTQP RQCNWSDRSA ATGEGNCDPN SRRDSGSGSC 240 SSKEVVPHRD EMSAAGVAPI SGYSAIDIQQ LKSDHFSFAP LRKSFDEVGI AEASTAREAP 300 ASGTCEELRD HQRPHPMAHE HHHQQQQHHH AHHQLATTAF HISRPSHPIS TIISPPPLHH 360 TSIILDQDPY HVPRIMLQNE NFQQQQQQQQ QQQQHHKLGG RSASGLEELI MGCTSTNIKE 420 ESSITNPQEA EWLKYSSFWP DPDNPDHHG

Sequence ? help Back to Top

Protein Sequence Length: 449 aa Download sequence

MNKSSLGSIS SSDLIDAKLE EHQMCGSKHC PGCGHKLEGK PDWLGLPAGV KFDPTDQELI  60
EHLEAKVEAK DMKSHPLIDE FIPTIEGEDG ICYTHPEKLP GVTRDGLSRH FFHRPSKAYT  120
TGTRKRRKIQ TECDLQGGET RWHKTGKTRP VMVNGKQKGC KKILVLYTNF GKNRKPEKTN  180
WVMHQYHLGQ HEEEKEGELV VSKIFYQTQP RQCNWSDRSA ATGEGNCDPN SRRDSGSGSC  240
SSKEVVPHRD EMSAAGVAPI SGYSAIDIQQ LKSDHFSFAP LRKSFDEVGI AEASTAREAP  300
ASGTCEELRD HQRPHPMAHE HHHQQQQHHH AHHQLATTAF HISRPSHPIS TIISPPPLHH  360
TSIILDQDPY HVPRIMLQNE NFQQQQQQQQ QQQQHHKLGG RSASGLEELI MGCTSTNIKE  420
ESSITNPQEA EWLKYSSFWP DPDNPDHHG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29230.1	1e-138	NAC family protein