PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023921088.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | NAC | ||||||||
Protein Properties | Length: 450aa MW: 50728.5 Da PI: 7.0578 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 115.7 | 4.8e-36 | 46 | 188 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkklelee.......vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk........ 79 lp+G++F+Ptd+el+ e+L++kve+k+++ + +i+ +i++++P++Lp v+ + + +fF++ +k+y+tg+rk+r+++ XP_023921088.1 46 LPAGVKFDPTDQELI-EHLEAKVEAKDMKSHPlidefipTIEGEdGICYTHPEKLP-GVTRDGLSRHFFHRPSKAYTTGTRKRRKIQtecdlqgg 138 799************.99*********5553344444434666646**********.555666799******************73334555544 PP NAM 80 sgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 + +W++tgk+++v++ +g+++g+kk+Lv+y g+++k+ekt+Wvmh+y+l XP_023921088.1 139 ETRWHKTGKTRPVMV-NGKQKGCKKILVLYtnFGKNRKPEKTNWVMHQYHL 188 778************.999***********5547999999*********98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 450 aa Download sequence |
MNKSSLGSIS SSDLIDAKLE EHQMCGSKHC PGCGHKLEGK PDWLGLPAGV KFDPTDQELI 60 EHLEAKVEAK DMKSHPLIDE FIPTIEGEDG ICYTHPEKLP GVTRDGLSRH FFHRPSKAYT 120 TGTRKRRKIQ TECDLQGGET RWHKTGKTRP VMVNGKQKGC KKILVLYTNF GKNRKPEKTN 180 WVMHQYHLGQ HEEEKEGELV VSKIFYQTQP RQCNWSDRSA ATGEGNCDPN SRRDSGSGSC 240 SSKEVVPHRD EMSAAGVAPI SGYSAIDIQQ LKSDHFSFAP LRKSFDEVGI AEASTAREAP 300 ASGTCEELRD HQRPHPMAHE HHHQQQQHHH AHHQLATTAF HISRPSHPIS TIISPPPLHH 360 TSIILDQDPY HVPRIMLQNE NFQQQQQQQQ QQQQQHHKLG GRSASGLEEL IMGCTSTNIK 420 EESSITNPQE AEWLKYSSFW PDPDNPDHHG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G29230.1 | 1e-138 | NAC family protein |