PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023921059.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

C2H2

Protein Properties

Length: 212aa MW: 23938.6 Da PI: 8.6316

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023921059.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.9	0.00016	87	109	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C + F ++ L H++ H XP_023921059.1 87 FSCNYCQRKFYSSQALGGHQNAH 109 89******************988 PP

Sequence ? help Back to Top
Protein Sequence Length: 212 aa Download sequence
MQHMTNPLTL LLNIYYSHPH FHFPYRLLSL ANRNLSLMDF QPNTSLHLSL QSDNQPNLDL 60 VLEPTPPSLS SSSSSSSHLS HSEPRIFSCN YCQRKFYSSQ ALGGHQNAHK LERTLAKKSR 120 ELSSTIRPHG GPTCHNRSGP NNISGPGQFH HIQPPIERHG NAARFASDHT CYGLREMEYG 180 SREGAGSSWH KGYRPAENVQ EEFNQLDLSL RL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57520.1	2e-31	C2H2 family protein