PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023920988.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

G2-like

Protein Properties

Length: 436aa MW: 47757.7 Da PI: 5.0044

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023920988.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	104.3	7.1e-33	215	269	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k r+rWtpeLHe+Fveav++LGGse+AtPk +++lm+v+gLt++hvkSHLQkYR+ XP_023920988.1 215 KSRMRWTPELHEAFVEAVNKLGGSEHATPKGVKNLMNVEGLTIYHVKSHLQKYRT 269 68****************************************************8 PP
2	Myb_DNA-binding	55.4	1.4e-17	217	268	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++e +v+av++lGg t+k + + m+ +g+t +++ks++qky+ XP_023920988.1 217 RMRWTPELHEAFVEAVNKLGGSehaTPKGVKNLMNvEGLTIYHVKSHLQKYR 268 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 436 aa Download sequence
MGSGAMSSSF PVFASSLDDR YSKYPDSFQV SSGREPVTNS ISTQASALAS NGNIDGRLLT 60 PSPGFPNDPH GRLPQNSPFI SQSSTDGASF PPNHSSHQDL QSTVLMNQYE GSQDIPPWCT 120 ATLQDILDFP DNIPVQTGQV EGATGVITSE DHTRRNDWQW ADGLISELDP DWNDLPDVNV 180 IDPISEQTQI HQQPPVPSAE FRSVANTLST APPAKSRMRW TPELHEAFVE AVNKLGGSEH 240 ATPKGVKNLM NVEGLTIYHV KSHLQKYRTA RHKPESSSEG TSEKKFTSIE EAKSADIKTS 300 MGITEALRLQ MELQKRLHEQ LEIQKKLQLQ IEQQGQYLQK MFETHKKIED GKSKTSTSAL 360 GDPSVPLSNA IADVKAETLK LDQPKAGIGA SNANPTPEEG FWDISQEQRA HEPGDGESNA 420 SPTKRARTDQ TGNIID

Sequence ? help Back to Top

Protein Sequence Length: 436 aa Download sequence

MGSGAMSSSF PVFASSLDDR YSKYPDSFQV SSGREPVTNS ISTQASALAS NGNIDGRLLT  60
PSPGFPNDPH GRLPQNSPFI SQSSTDGASF PPNHSSHQDL QSTVLMNQYE GSQDIPPWCT  120
ATLQDILDFP DNIPVQTGQV EGATGVITSE DHTRRNDWQW ADGLISELDP DWNDLPDVNV  180
IDPISEQTQI HQQPPVPSAE FRSVANTLST APPAKSRMRW TPELHEAFVE AVNKLGGSEH  240
ATPKGVKNLM NVEGLTIYHV KSHLQKYRTA RHKPESSSEG TSEKKFTSIE EAKSADIKTS  300
MGITEALRLQ MELQKRLHEQ LEIQKKLQLQ IEQQGQYLQK MFETHKKIED GKSKTSTSAL  360
GDPSVPLSNA IADVKAETLK LDQPKAGIGA SNANPTPEEG FWDISQEQRA HEPGDGESNA  420
SPTKRARTDQ TGNIID

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G29000.2	4e-79	G2-like family protein