PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023920986.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

G2-like

Protein Properties

Length: 452aa MW: 49422.7 Da PI: 5.1942

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023920986.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	104.3	7.5e-33	231	285	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k r+rWtpeLHe+Fveav++LGGse+AtPk +++lm+v+gLt++hvkSHLQkYR+ XP_023920986.1 231 KSRMRWTPELHEAFVEAVNKLGGSEHATPKGVKNLMNVEGLTIYHVKSHLQKYRT 285 68****************************************************8 PP
2	Myb_DNA-binding	55.3	1.5e-17	233	284	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++e +v+av++lGg t+k + + m+ +g+t +++ks++qky+ XP_023920986.1 233 RMRWTPELHEAFVEAVNKLGGSehaTPKGVKNLMNvEGLTIYHVKSHLQKYR 284 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 452 aa Download sequence
MNMHPALSVQ GSGAKQLRDM GSGAMSSSFP VFASSLDDRY SKYPDSFQVS SGREPVTNSI 60 STQASALASN GNIDGRLLTP SPGFPNDPHG RLPQNSPFIS QSSTDGASFP PNHSSHQDLQ 120 STVLMNQYEG SQDIPPWCTA TLQDILDFPD NIPVQTGQVE GATGVITSED HTRRNDWQWA 180 DGLISELDPD WNDLPDVNVI DPISEIHQQP PVPSAEFRSV ANTLSTAPPA KSRMRWTPEL 240 HEAFVEAVNK LGGSEHATPK GVKNLMNVEG LTIYHVKSHL QKYRTARHKP ESSSEGTSEK 300 KFTSIEEAKS ADIKTSMGIT EALRLQMELQ KRLHEQLEIQ KKLQLQIEQQ GQYLQKMFET 360 HKKIEDGKSK TSTSALGDPS VPLSNAIADV KAETLKLDQP KAGIGASNAN PTPEEGFWDI 420 SQEQRAHEPG DGESNASPTK RARTDQTGNI ID

Sequence ? help Back to Top

Protein Sequence Length: 452 aa Download sequence

MNMHPALSVQ GSGAKQLRDM GSGAMSSSFP VFASSLDDRY SKYPDSFQVS SGREPVTNSI  60
STQASALASN GNIDGRLLTP SPGFPNDPHG RLPQNSPFIS QSSTDGASFP PNHSSHQDLQ  120
STVLMNQYEG SQDIPPWCTA TLQDILDFPD NIPVQTGQVE GATGVITSED HTRRNDWQWA  180
DGLISELDPD WNDLPDVNVI DPISEIHQQP PVPSAEFRSV ANTLSTAPPA KSRMRWTPEL  240
HEAFVEAVNK LGGSEHATPK GVKNLMNVEG LTIYHVKSHL QKYRTARHKP ESSSEGTSEK  300
KFTSIEEAKS ADIKTSMGIT EALRLQMELQ KRLHEQLEIQ KKLQLQIEQQ GQYLQKMFET  360
HKKIEDGKSK TSTSALGDPS VPLSNAIADV KAETLKLDQP KAGIGASNAN PTPEEGFWDI  420
SQEQRAHEPG DGESNASPTK RARTDQTGNI ID

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G29000.2	1e-79	G2-like family protein