PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023920983.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

G2-like

Protein Properties

Length: 455aa MW: 49780.1 Da PI: 5.1942

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023920983.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	104.2	7.5e-33	234	288	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k r+rWtpeLHe+Fveav++LGGse+AtPk +++lm+v+gLt++hvkSHLQkYR+ XP_023920983.1 234 KSRMRWTPELHEAFVEAVNKLGGSEHATPKGVKNLMNVEGLTIYHVKSHLQKYRT 288 68****************************************************8 PP
2	Myb_DNA-binding	55.3	1.5e-17	236	287	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++e +v+av++lGg t+k + + m+ +g+t +++ks++qky+ XP_023920983.1 236 RMRWTPELHEAFVEAVNKLGGSehaTPKGVKNLMNvEGLTIYHVKSHLQKYR 287 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 455 aa Download sequence
MNMHPALSVQ GSGAKQLRDM GSGAMSSSFP VFASSLDDRY SKYPDSFQVS SGREPVTNSI 60 STQASALASN GNIDGRLLTP SPGFPNDPHG RLPQNSPFIS QSSTDGASFP PNHSSHQDLQ 120 STVLMNQYEG SQDIPPWCTA TLQDILDFPD NIPVQTGQVE GATGVITSED HTRRNDWQWA 180 DGLISELDPD WNDLPDVNVI DPISEQTQIH QQPPVPSAEF RSVANTLSTA PPAKSRMRWT 240 PELHEAFVEA VNKLGGSEHA TPKGVKNLMN VEGLTIYHVK SHLQKYRTAR HKPESSSEGT 300 SEKKFTSIEE AKSADIKTSM GITEALRLQM ELQKRLHEQL EIQKKLQLQI EQQGQYLQKM 360 FETHKKIEDG KSKTSTSALG DPSVPLSNAI ADVKAETLKL DQPKAGIGAS NANPTPEEGF 420 WDISQEQRAH EPGDGESNAS PTKRARTDQT GNIID

Sequence ? help Back to Top

Protein Sequence Length: 455 aa Download sequence

MNMHPALSVQ GSGAKQLRDM GSGAMSSSFP VFASSLDDRY SKYPDSFQVS SGREPVTNSI  60
STQASALASN GNIDGRLLTP SPGFPNDPHG RLPQNSPFIS QSSTDGASFP PNHSSHQDLQ  120
STVLMNQYEG SQDIPPWCTA TLQDILDFPD NIPVQTGQVE GATGVITSED HTRRNDWQWA  180
DGLISELDPD WNDLPDVNVI DPISEQTQIH QQPPVPSAEF RSVANTLSTA PPAKSRMRWT  240
PELHEAFVEA VNKLGGSEHA TPKGVKNLMN VEGLTIYHVK SHLQKYRTAR HKPESSSEGT  300
SEKKFTSIEE AKSADIKTSM GITEALRLQM ELQKRLHEQL EIQKKLQLQI EQQGQYLQKM  360
FETHKKIEDG KSKTSTSALG DPSVPLSNAI ADVKAETLKL DQPKAGIGAS NANPTPEEGF  420
WDISQEQRAH EPGDGESNAS PTKRARTDQT GNIID

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G29000.2	4e-79	G2-like family protein