PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023920686.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | G2-like | ||||||||
Protein Properties | Length: 313aa MW: 34276.8 Da PI: 4.964 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 94.1 | 1.1e-29 | 161 | 214 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 +prl+Wtp+LH+rFv++v +L G+++A+Pkti++lm+v+gLt+e+v+SHLQkYRl XP_023920686.1 161 RPRLVWTPQLHKRFVDVVGHL-GIKNAVPKTIMQLMNVEGLTRENVASHLQKYRL 214 59*******************.********************************8 PP | |||||||
2 | Myb_DNA-binding | 45.8 | 1.4e-14 | 163 | 213 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r+ WT+++++++vd+v lG + +ktI++ m+ +g+t++++ s++qky+ XP_023920686.1 163 RLVWTPQLHKRFVDVVGHLGIKnaVPKTIMQLMNvEGLTRENVASHLQKYR 213 789*******************9***************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 313 aa Download sequence |
MLMKMSEYEF FGGENGGGDE DRVTEWEVGL PSVDDLTPLS QLLISPELAS AFSISPEPYR 60 TAVEVNRASQ TTFSTLRGVN HSTAKGSLFE TTDPDPDPDQ DPMVVEADEN ETTDRDGSGS 120 DPKRSRKDDE GCVEIEVEEV DSALRNNEND ESSAAARAVK RPRLVWTPQL HKRFVDVVGH 180 LGIKNAVPKT IMQLMNVEGL TRENVASHLQ KYRLYLKRQQ GGGGGGGGGG GGGGLFSDGP 240 SSTSTSTSDH LFASTTPHLP NYHMPTMMPQ MLGHMGMPPM GHHHHHHQYN MFQQQQQQSG 300 NSNYQYPVAP NEN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G59570.1 | 4e-64 | G2-like family protein |