PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023920677.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | MYB_related | ||||||||
Protein Properties | Length: 233aa MW: 26146.5 Da PI: 8.7066 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 42.3 | 1.7e-13 | 121 | 165 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT eE+el++++ +++G+g+W++I+r ++ + q+ s+ qky XP_023920677.1 121 PWTSEEHELFLRGLEKFGKGDWRSISRQCVVTKNPTQVASHAQKY 165 8**************************9999*************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 233 aa Download sequence |
MEPSYFSNSS LCNPSLSCLS RPPQLEYTTE WNFEENKIFE NALAEFDLDC PQLFEKIAIR 60 LPQKTVPQIK KHLEDLSNDI EMIDSGLISV PNFIKTSETN EKKSAPAVER KSGKKRRKGV 120 PWTSEEHELF LRGLEKFGKG DWRSISRQCV VTKNPTQVAS HAQKYFLRLQ NSGAQAQQST 180 LKPSNKTSKE ALMSSTAFAT ATTAVAAANL PAPSVASTSD QFYASFHSYH CRY |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 113 | 119 | GKKRRKG |
2 | 114 | 118 | KKRRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G38090.1 | 3e-43 | MYB family protein |