PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023920665.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

MYB

Protein Properties

Length: 264aa MW: 29756.3 Da PI: 6.5133

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023920665.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51.3	2.8e-16	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd +l++++ ++G+g +W + +++ g++R++k+c++rw++yl XP_023920665.1 14 KGPWSPEEDAKLKEYIDKYGTGgNWIALPQKAGLKRCGKSCRLRWLNYL 62 79*********************************************97 PP
2	Myb_DNA-binding	38.4	2.9e-12	69	111	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +T+ Ed ++ +++ G++ W+ Ia+ ++ gRt++++k++w++ XP_023920665.1 69 GEFTENEDRIICSLFANIGSR-WSIIAAQLP-GRTDNDIKNYWNT 111 78*****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 264 aa Download sequence
MGRAPCCDKA NVKKGPWSPE EDAKLKEYID KYGTGGNWIA LPQKAGLKRC GKSCRLRWLN 60 YLRPNIKHGE FTENEDRIIC SLFANIGSRW SIIAAQLPGR TDNDIKNYWN TKLKKKLMAA 120 AGPVLQAQES FVGPPQNYQI KDNLLMFGSE ASCSSSDGSS NNLINHGNGE REYEYGGNYG 180 EVQMGGLQQS FLYNGNIDGN QRFMISNGDG DVNGNWIQKQ NGMWSDPPLD YGLEEIKQLI 240 STSNCNNFLF DENKTDQEKQ MMYY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57620.1	7e-78	MYB family protein