PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023920664.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

MYB

Protein Properties

Length: 326aa MW: 36179.3 Da PI: 7.2142

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023920664.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50.8	3.8e-16	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd +l++++ ++G+g +W + +++ g++R++k+c++rw++yl XP_023920664.1 14 KGPWSPEEDAKLKEYIDKYGTGgNWIALPQKAGLKRCGKSCRLRWLNYL 62 79*********************************************97 PP
2	Myb_DNA-binding	37.9	4e-12	69	111	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +T+ Ed ++ +++ G++ W+ Ia+ ++ gRt++++k++w++ XP_023920664.1 69 GEFTENEDRIICSLFANIGSR-WSIIAAQLP-GRTDNDIKNYWNT 111 78*****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 326 aa Download sequence
MGRAPCCDKA NVKKGPWSPE EDAKLKEYID KYGTGGNWIA LPQKAGLKRC GKSCRLRWLN 60 YLRPNIKHGE FTENEDRIIC SLFANIGSRW SIIAAQLPGR TDNDIKNYWN TKLKKKLMGI 120 FPSSQRKAHQ AATLSSLLQT SSSSSISPTS SYKGYNSASS FTDLEFATSL LSSNNCCTNA 180 AAAGPVLQAQ ESFVGPPQNY QIKDNLLMFG SEASCSSSDG SSNNLINHGN GEREYEYGGN 240 YGEVQMGGLQ QSFLYNGNID GNQRFMISNG DGDVNGNWIQ KQNGMWSDPP LDYGLEEIKQ 300 LISTSNCNNF LFDENKTDQE KQMMYY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57620.1	3e-78	MYB family protein