PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023920526.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family HD-ZIP
Protein Properties Length: 284aa    MW: 32341.3 Da    PI: 5.4584
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023920526.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox56.16.3e-1880133356
                     --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     k+++++ eq+++Le+ Fe  +++  e++ +LA+ lgL+ rq+ +WFqNrRa++k
  XP_023920526.1  80 KKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWK 133
                     456899***********************************************9 PP

2HD-ZIP_I/II129.21.7e-4179169191
     HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 
                     ekkrrl+ eqvk+LE++Fe  +kLeperK++lar+Lglqprq+a+WFqnrRAR+ktkqlEkdy+ Lkr+++a+k++n++L++++++L++e+
  XP_023920526.1  79 EKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYDLLKRQFEAVKADNDALQAQNQKLQAEI 169
                     69**************************************************************************************987 PP

Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    
MTSNGMTFFS PNFMLQPPHE DDNQHPTSLN PILPSCTPQD FHGVASFLGK RSMSFSGVEL  60
GDDGNGEDDL SDDGSQVGEK KRRLNMEQVK TLEKNFELGN KLEPERKMQL ARALGLQPRQ  120
IAIWFQNRRA RWKTKQLEKD YDLLKRQFEA VKADNDALQA QNQKLQAEIL ALKNREPTES  180
INLNKETEGS CSNRSENSSE IKLDISRTPA IDSPLSTHPT SRPLFPTSMI RPPGVAQLFQ  240
TTSRPELQCQ KMDQIVKEES LSNMFCGMDD QSAFWPWLEQ QHFN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1128136RRARWKTKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69780.11e-114HD-ZIP family protein