PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023920077.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

NAC

Protein Properties

Length: 404aa MW: 45389.3 Da PI: 7.4455

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023920077.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	170.8	4.4e-53	15	142	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 + pGfrFhPtdeelv +yLk+k+++++l++ e ik++diyk++PwdLpk ++++ekewyfF++rd+ky+++ r+nr+t +g+Wkatg+d++++s+ XP_023920077.1 15 MLPGFRFHPTDEELVGFYLKRKIQQRPLSI-ELIKQLDIYKYDPWDLPKFATTGEKEWYFFCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSS 108 579*************************.89***********8888899***********************************9 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128 +++ +glkk+Lvfykgra kg+ktdW+mhe+rl XP_023920077.1 109 eGSKCIGLKKSLVFYKGRAAKGVKTDWMMHEFRL 142 56677*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 404 aa Download sequence
MDERIIDGDK LDEVMLPGFR FHPTDEELVG FYLKRKIQQR PLSIELIKQL DIYKYDPWDL 60 PKFATTGEKE WYFFCPRDRK YRNSARPNRV TGAGFWKATG TDRPIYSSEG SKCIGLKKSL 120 VFYKGRAAKG VKTDWMMHEF RLPSLTDPTA PPKRFVDKSI PANDSWAICR IFKKTNSTTQ 180 RALSHSWVSP SPTETNTLDM LVKGPHCTQF SQENMSLTSK TNCSAATHFS INNDIQQLSS 240 TTFSPLDFVC YKSLNQLADK PSQLTGDLPS SFLFSPLETS TPTKCTVDIS SMLLNMPSSM 300 LGDFGSKVSE SIDYSGPQEH CNGFSFSLLQ DMQGNIGSGG EQANALMKNP NLTHVDDHWE 360 TVRSIGFPLS LPSNNDAWKT NLVWDSSPCP SEMSTSFSTT KSYT

Sequence ? help Back to Top

Protein Sequence Length: 404 aa Download sequence

MDERIIDGDK LDEVMLPGFR FHPTDEELVG FYLKRKIQQR PLSIELIKQL DIYKYDPWDL  60
PKFATTGEKE WYFFCPRDRK YRNSARPNRV TGAGFWKATG TDRPIYSSEG SKCIGLKKSL  120
VFYKGRAAKG VKTDWMMHEF RLPSLTDPTA PPKRFVDKSI PANDSWAICR IFKKTNSTTQ  180
RALSHSWVSP SPTETNTLDM LVKGPHCTQF SQENMSLTSK TNCSAATHFS INNDIQQLSS  240
TTFSPLDFVC YKSLNQLADK PSQLTGDLPS SFLFSPLETS TPTKCTVDIS SMLLNMPSSM  300
LGDFGSKVSE SIDYSGPQEH CNGFSFSLLQ DMQGNIGSGG EQANALMKNP NLTHVDDHWE  360
TVRSIGFPLS LPSNNDAWKT NLVWDSSPCP SEMSTSFSTT KSYT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G26870.1	1e-118	NAC family protein